FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014641

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014641
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34135721
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG41750.06.946174645-49
GATCGGA132400.06.7039891
ATCGGAA146800.06.17344332
TCGGAAG152050.05.9126293
AGATCGG140500.05.728728145
CTCGTAT51900.05.727907740-44
CGTATGC53600.05.6269245-49
CGGAAGA169250.05.5684294
TCTCGTA52200.05.1671640-44
Produced by FastQC (version 0.11.5)