FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73894325
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC298550.09.9153679
GATCGGA321150.09.1161991
AGAGCGT341600.08.8566988
ATCGGAA351850.08.506282
TCGGAAG371750.08.1196833
CGGAAGA411800.07.47059874
AAGAGCG412050.07.43023257
CGCCGTA94150.07.14950555-59
TCGCCGT112600.06.08087555-59
GCCGTAT135000.05.307802755-59
GTCGCCG134400.05.213020355-59
Produced by FastQC (version 0.11.5)