FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24078353
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC136100.06.819428145
ATCGGAA199600.06.3936405145
GATCGGA193900.06.3572197145
TATGCCG39500.06.240410345-49
TAGATCG70200.05.8875394145
AGATCGG201000.05.7719164145
TCTCGTA45400.05.42995340-44
CTCGTAT45950.05.428076340-44
GCACACG200000.05.365718145
CGTATGC47100.05.17189545-49
Produced by FastQC (version 0.11.5)