FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116187412
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG170850.08.66462145-49
GATCGGA546500.08.4032821
ATCGGAA590900.07.8826912
TCGGAAG604600.07.7461683
CTCGTAT206200.07.1510240-44
CGGAAGA663350.07.0054424
TCTCGTA208500.06.86351840-44
ATGCCGT249650.06.144590445-49
CGTATGC210450.06.049011745-49
CGTGTAG276000.05.489611630-34
CCGTGTA283150.05.366351630-34
AGATCGG564150.05.1414948145
Produced by FastQC (version 0.11.5)