FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60376762
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA54150.07.094465355-59
GCGTCGG34851.6734703E-106.036387145
TCGCCGT68250.05.798721355-59
GATCGGA354700.05.6650066145
CGTCGTG210900.05.5377216145
GTCGCCG72600.05.531149455-59
GAGCGTC281850.05.19401459
GCGTCGT212500.05.1887946145
ATCGGAA374500.05.152425145
Produced by FastQC (version 0.11.5)