FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67957110
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC323150.015.3677299
AGAGCGT359600.013.6285718
GATCGGA358600.013.4217781
ATCGGAA382500.012.7762622
TCGGAAG403850.012.04513
CGGAAGA436450.011.211894
AAGAGCG443600.010.9334677
CGCCGTA104100.010.66927155-59
TCGCCGT125600.08.94682255-59
GCCGTAT140250.08.16734655-59
GTCGCCG140000.07.95407955-59
TGGTCGC164300.06.971914350-54
CGTATCA169400.06.847495660-64
GTGGTCG180150.06.43899750-54
CCGTATC159500.06.290723360-64
GGTCGCC168600.05.882409655-59
GAAGAGC910450.05.8286946
TCTCGGT239450.05.226037545-49
ATTCGCT233800.05.035508630-34
Produced by FastQC (version 0.11.5)