FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39560347
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA164900.011.9693471
ATCGGAA173900.011.6376972
TCGGAAG186150.010.8328873
CGGAAGA204750.09.9170344
TATGCCG62900.07.79162845-49
TCTCGTA72700.06.761328740-44
CTCGTAT73800.06.62125540-44
CGTATGC75050.06.472264345-49
AGATCGG169900.06.2317953145
TATCTCG79950.06.20260940-44
ATGCCGT87150.05.8564945-49
GCCGTCT92300.05.545179450-54
AGAGCAC418250.05.37334068
ATCTCGT95300.05.24919840-44
TGCCGTC89800.05.053713350-54
Produced by FastQC (version 0.11.5)