FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37398275
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC311950.06.1826167145
CGTCTGA278500.06.066056145
AGATCGG483750.05.9953523145
ATCGGAA463600.05.9274983145
GATCGGA462800.05.8750777145
TCGGAAG463050.05.699663145
ACGTCTG315950.05.5765247145
TATGCCG72750.05.481015745-49
TAGATCG157300.05.439124145
CGGAAGA467700.05.317438145
CACGTCT345950.05.0510235145
CACACGT413650.05.013127145
Produced by FastQC (version 0.11.5)