Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005014793 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 86268847 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 37310 | 0.0 | 8.931279 | 1 |
ATCGGAA | 40790 | 0.0 | 8.532424 | 2 |
TCGGAAG | 42850 | 0.0 | 8.019591 | 3 |
TATGCCG | 13100 | 0.0 | 7.9914823 | 45-49 |
CGGAAGA | 46050 | 0.0 | 7.666971 | 4 |
CTCGTAT | 15540 | 0.0 | 6.587811 | 40-44 |
TCTCGTA | 15890 | 0.0 | 6.260192 | 40-44 |
CGTATGC | 16445 | 0.0 | 5.986836 | 45-49 |
ATGCCGT | 18375 | 0.0 | 5.8156943 | 45-49 |
TATCTCG | 17405 | 0.0 | 5.4403467 | 40-44 |
GCCGTCT | 19730 | 0.0 | 5.1442614 | 50-54 |