FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134481786
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG450050.06.378782145
AGCGTCG495700.06.0984645145
AGATCGG842000.06.009616145
CGCCGTA131900.05.95792155-59
GATCGGA779950.05.8370876145
TAGATCG315450.05.6533766145
GCGTCGT455400.05.450608140-144
GAGCGTC639800.05.3481197145
ATCGGAA813800.05.335959145
TCGGAAG846400.05.053354145
GTCGTGT502850.05.045834145
Produced by FastQC (version 0.11.5)