FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014813

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014813
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78340452
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC51600.025.1313741
GCGACCA72800.019.021033
GGCGACC86500.016.6791422
CGACCAC92500.015.2835644
ACCGAGA145050.010.0458149
CCACCGA149550.09.98636157
ACGACGC33000.09.05106545-49
ACCACCG182250.08.194576
CACCGAG193600.07.86358838
CGACGCT41600.07.14507745-49
CACGACG43100.06.728203345-49
AGATCGG478450.05.8334603145
GATCGGA450750.05.7898707145
ATCGGAA474300.05.318978145
Produced by FastQC (version 0.11.5)