FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65654079
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA60950.06.87510855-59
GAGCGTC259600.06.67496359
AGAGCGT303150.05.7877828
CGTCGTG187650.05.717646145
GATCGGA307200.05.67442131
AGATCGG332850.05.6409893145
TCGCCGT77750.05.482798655-59
ATCGGAA331450.05.40322162
GCGTCGT186200.05.372835145
TCGGAAG347050.05.22253663
TAGATCG133400.05.1626406145
Produced by FastQC (version 0.11.5)