FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014834

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014834
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66014543
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA60500.07.40531355-59
GAGCGTC258650.06.7832139
AGAGCGT300150.05.8936338
GATCGGA305800.05.8802641
TCGCCGT77900.05.844300355-59
AGATCGG328800.05.7986937145
ATCGGAA326400.05.5536482
AGCGTCG201150.05.514138145
TCGTGTA209500.05.3981733145
TCGGAAG346000.05.3221683
GCCGTAT96550.05.1959455-59
AAGAGCG366200.05.14764557
TAGATCG131350.05.0224724145
Produced by FastQC (version 0.11.5)