FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005014857

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014857
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92498731
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG134600.06.56074645-49
GATCGGA562050.05.741294145
CGGCGAC32905.5739292E-85.5381061
AGATCGG593350.05.389548145
ATCGGAA593950.05.35861162
TCGGAAG600300.05.34986643
CTCGTAT170000.05.254338740-44
TCTCGTA171700.05.168534340-44
CGTATGC167100.05.163230445-49
CGTCTGA408450.05.148537145
CGGAAGA640250.05.09534
Produced by FastQC (version 0.11.5)