Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005014931 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17566028 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 40 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 2795 | 0.0 | 6.4325876 | 45-49 |
GATCGGA | 10610 | 0.0 | 6.288618 | 145 |
CGTCTGA | 7875 | 0.0 | 5.7098393 | 145 |
GATGTCG | 1550 | 0.0067057763 | 5.6435566 | 1 |
CGCGTAG | 395 | 5.61605E-4 | 5.506274 | 130-134 |
ATCGGAA | 11090 | 0.0 | 5.2970314 | 2 |
AGATCGG | 11000 | 0.0 | 5.2744856 | 145 |
CGTATGC | 3660 | 0.0 | 5.2689557 | 40-44 |
CTCGTAT | 3430 | 0.0 | 5.2418137 | 40-44 |
TCTCGTA | 3195 | 0.0 | 5.218924 | 40-44 |