FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014931

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014931
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17566028
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG27950.06.432587645-49
GATCGGA106100.06.288618145
CGTCTGA78750.05.7098393145
GATGTCG15500.00670577635.64355661
CGCGTAG3955.61605E-45.506274130-134
ATCGGAA110900.05.29703142
AGATCGG110000.05.2744856145
CGTATGC36600.05.268955740-44
CTCGTAT34300.05.241813740-44
TCTCGTA31950.05.21892440-44