FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39739317
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA203350.012.2505871
ATCGGAA216250.011.4659222
TCGGAAG219900.011.4075273
CGGAAGA238400.010.58311754
TATGCCG61100.09.58771645-49
CTCGTAT76450.07.832635440-44
CGTATGC74950.07.56449845-49
TCTCGTA75300.07.54790540-44
ATGCCGT87550.07.02238645-49
TATCTCG84550.06.73929240-44
GCCGTCT93300.06.26350850-54
TCGTATG85250.06.10625745-49
TGCCGTC88600.06.022937350-54
AGATCGG204150.05.931948145
ATCTCGT99950.05.874995740-44
AGAGCAC463700.05.8627448
GAGCACA508000.05.52273279
GAAGAGC519900.05.34052666
CGTCTTC122350.05.262271450-54
CCGTCTT120300.05.11086650-54
Produced by FastQC (version 0.11.5)