FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005014997

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005014997
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55984726
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC16200.017.4539246
CGACGCT20150.014.0324357
CACGACG24950.011.3328185
GATCGGA264200.06.54029231
TATGCCG79050.06.236101645-49
ATCGGAA284900.06.21002342
TCGGAAG294850.06.1226883
CGGAAGA319400.05.652084
GACGCTC64250.05.528618
CTCGTAT94500.05.201284440-44
AGATCGG281100.05.1581326145
Produced by FastQC (version 0.11.5)