FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005015039

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015039
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75929154
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC33000.014.3415651
GCGACCA66650.08.9192623
GGCGACC67900.08.6523182
TATGCCG161700.07.98060945-49
CGACCAC87900.07.42283874
GATCGGA742700.07.03895471
ATCGGAA752350.07.0375282
TCGGAAG751600.06.9930483
CGTATGC187550.06.872911545-49
CTCGTAT188450.06.801717340-44
CGGAAGA778150.06.7917334
TCTCGTA189550.06.57100640-44
ATGCCGT207250.06.282577545-49
GCCGTCT211600.06.263422550-54
AGATCGG760200.05.47613145
TGCCGTC214150.05.383072450-54
CGTCTTC258850.05.360989650-54
ATCTCGT235200.05.35112240-44
TAGATCG264950.05.310404145
ACACGTC547700.05.2437525145
Produced by FastQC (version 0.11.5)