FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005015042

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015042
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34838039
Sequences flagged as poor quality0
Sequence length151
%GC42

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC260950.06.30626259
CGCCGTA67800.06.2447355-59
AGAGCGT288950.05.84568558
GATCGGA303750.05.632391
ATCGGAA309050.05.53859142
TCGGAAG321800.05.4067023
TCGCCGT81150.05.34248355-59
GCGTCGG40951.6971171E-95.315931145
AAGAGCG337700.05.10915147
CGGAAGA340550.05.10893154
AGCGTCG221150.05.052958145
GCCGTAT85850.05.01622155-59
Produced by FastQC (version 0.11.5)