FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005015047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65191074
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA496250.014.1209781
ATCGGAA520150.013.4590742
TCGGAAG526550.013.199093
CGGAAGA545100.012.8030994
TATGCCG144850.012.29699145-49
CTCGTAT169000.010.445740-44
CGTATGC167950.010.15691745-49
TCTCGTA168700.010.07766540-44
ATGCCGT186400.09.44704245-49
GCCGTCT184400.09.14083350-54
AGAGCAC874250.08.2309448
CGTCTTC227150.08.1415150-54
TCGTATG186600.08.03108845-49
ATCTCGT209750.07.96026440-44
TGCCGTC181850.07.86630650-54
GAGCACA937000.07.7570639
CCGTCTT226900.07.665028650-54
GAAGAGC980950.07.52033046
CGGCGAC31503.7362042E-95.99377971
AATCTCG302400.05.933566640-44
Produced by FastQC (version 0.11.5)