FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005015057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51448230
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC27900.09.9642351
GCGACCA41200.07.03821473
GGCGACC47150.06.61132672
GATCGGA251550.06.427023145
AGATCGG273200.06.395369145
CGGAAGA294300.06.158558145
CGACCAC53500.05.96207954
ACACGTC199050.05.681875145
ATCGGAA266800.05.543367145
TAGATCG107600.05.053337145
Produced by FastQC (version 0.11.5)