FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005015059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49436306
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC24000.012.2037431
GCGACCA43400.07.35030753
GGCGACC43650.07.3093112
GATCGGA255200.06.4486637145
TAGATCG109850.06.4017134145
CGACCAC51650.05.75514274
AGATCGG274550.05.344406140-144
TCGGAAG279100.05.221085145
ATCGGAA268550.05.204659140-144
Produced by FastQC (version 0.11.5)