FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005015060

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015060
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49436306
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG173400.06.5610304145
GCGTCGT173350.05.9358916145
GATCGGA287100.05.8051853145
GCGTCGG34451.7030106E-75.2586255145
AGCGTCG187350.05.229341140-144
TAGATCG116800.05.149401145
Produced by FastQC (version 0.11.5)