FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005015121

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015121
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67393245
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG101050.07.504164745-49
TAGATCG184100.06.0671463145
ATCGGAA509750.06.0471287145
CTCGTAT125700.06.009579740-44
GATCGGA491200.05.94037251
AGATCGG513450.05.932922145
TCGGAAG514550.05.84707363
CGTATGC124550.05.84382245-49
TCTCGTA129150.05.815365340-44
CGGAAGA531400.05.68895534
ATGCCGT142450.05.51662945-49
CGTCTGA327450.05.293835145
ACACGTC356800.05.061649145
ACGTCTG389150.05.013635145
Produced by FastQC (version 0.11.5)