FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005015188

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015188
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47055039
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG43000.07.420625145
CGCCGTA102600.07.136605755-59
TCGCCGT118600.06.22272855-59
GCCGTAT123300.05.90321155-59
GAGCGTC599700.05.83874239
CGTCGTG497850.05.8120675145
GTCGCCG136900.05.50741255-59
AGAGCGT659500.05.39728938
CGTATCA143900.05.360506560-64
GCGTCGT511050.05.207855145
CCGTATC142050.05.17513560-64
TGGTCGC150750.05.030304450-54
AGATCGG780250.05.028283145
Produced by FastQC (version 0.11.5)