FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005015233

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015233
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58551368
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC42950.016.3477941
GCGACCA57100.012.9505253
GGCGACC68150.010.8564632
CGACCAC72250.010.2349034
CCACCGA118000.07.1877767
ACCGAGA110250.06.8382579
CGACGCT28800.05.89078145-49
CACCGAG144050.05.8376148
ACGACGC26750.05.745946445-49
ACACGTC438550.05.4056077145
CGTCTGA401100.05.295791145
ACCACCG155550.05.21961746
ATCGGAA613700.05.174089145
GATCGGA608000.05.162977145
AGATCGG645650.05.0191045145
Produced by FastQC (version 0.11.5)