FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005015239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015239
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80125242
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC61400.07.71627141
GCGACCA77200.06.66767843
CGACCAC94350.06.30055334
GGCGACC91400.05.8712
GATCGGA585400.05.8469534145
AGATCGG629450.05.5529804145
ATCGGAA600100.05.462044145
CGGAAGA634050.05.3525743145
ACACGTC426700.05.0304804145
Produced by FastQC (version 0.11.5)