FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005015241

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015241
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61688886
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGACCA59000.010.6892923
CGGCGAC46950.010.2942921
CGACCAC74700.08.5397224
GGCGACC72550.08.509762
AGATCGG455150.05.8624973145
TAGATCG164550.05.5521607145
ACCGAGA111050.05.5485879
GATCGGA423250.05.4820433145
CCACCGA123300.05.4676657
TCGGAAG453200.05.215754145
ATCGGAA436950.05.1774063145
CGGAAGA469550.05.095907145
Produced by FastQC (version 0.11.5)