FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005015317

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015317
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences402385293
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1016800.017.2270471
TCGGAAG1144400.015.313652
CGGAAGA1324200.013.2314163
TATGCCG675000.06.114696545-49
CTCGTAT688650.05.624984740-44
TCTCGTA725200.05.35148140-44
AGAGCAC3710000.05.349497
CGTATGC809500.05.227673545-49
TCCGATC262850.05.1296563
CGATAGA824150.05.12059635-39
Produced by FastQC (version 0.11.5)