FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005015318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences402385293
Sequences flagged as poor quality0
Sequence length151
%GC40

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC330150.010.3240343
AGCGTCG1747700.09.7890439
GAGCGTC2051350.08.4356968
ATCGGAA2170700.08.0501551
CCGATCT453900.07.588744
TCGGAAG2326900.07.504162
AGAGCGT2392950.07.3645827
TTCCGAT523400.07.09643032
CGGAAGA2543550.06.97110133
AAGAGCG2839000.06.26878266
CTTCCGA666600.05.68013761
Produced by FastQC (version 0.11.5)