FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005015969

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015969
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences438035227
Sequences flagged as poor quality0
Sequence length30-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA1130850.015.9483191
TCGGAAG1255450.014.2175752
CGGAAGA1517200.011.7706343
TATGCCG718600.05.61527345-49
CTCGTAT736250.05.048422340-44
AGAGCAC4016550.05.0368797
Produced by FastQC (version 0.11.5)