FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005015970

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005015970
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences438035227
Sequences flagged as poor quality0
Sequence length30-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG1784700.09.3686479
GAGCGTC2099900.08.0699828
ATCGGAA2313700.07.75015261
TCGGAAG2477650.07.2427182
AGAGCGT2436450.07.04569347
TCCGATC335250.06.97433043
CGGAAGA2786050.06.4988733
AAGAGCG2990450.05.98427876
CGAGTAA480700.05.1907771
CCGATCT466050.05.18721064
Produced by FastQC (version 0.11.5)