FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005026478

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005026478
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32539883
Sequences flagged as poor quality0
Sequence length101
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA224700.08.07532594-95
AGATCGG259100.07.883167794-95
ATCGGAA214450.07.79679894-95
TAGATCG79750.07.623932494-95
TCGGAAG247300.06.23290294-95
CGGAAGA276500.05.46300694-95
AAGATCG111300.05.27073994-95
Produced by FastQC (version 0.11.5)