FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60487540
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG98250.07.968977545-49
GATCGGA461700.06.7150751
CTCGTAT116850.06.65098840-44
ATCGGAA475400.06.6486822
TCGGAAG477600.06.64841373
CGGAAGA498800.06.46741964
AGATCGG479150.06.460846145
CGTATGC120750.06.25593245-49
TCTCGTA119900.06.11901440-44
ATGCCGT132700.05.96572445-49
TAGATCG174200.05.743333145
ACACGTC338850.05.498683145
ACGTCTG358900.05.3733015145
TATCTCG135150.05.203263340-44
GCCGTCT148450.05.16676450-54
Produced by FastQC (version 0.11.5)