FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028431

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028431
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences120040826
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG161400.06.620553545-49
GATCGGA645150.06.078081
ATCGGAA685750.05.7204442
TCGGAAG707700.05.62473963
CTCGTAT203350.05.50469340-44
AGATCGG680500.05.272949145
CGTATGC201100.05.26309445-49
CGGAAGA754350.05.23841674
Produced by FastQC (version 0.11.5)