FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57124367
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG244400.06.495906145
GATCGGA414450.05.9995513145
GCGTCGT248300.05.8683515145
ATCGGAA425850.05.8559666145
AGATCGG447400.05.573901145
GAGCGTC328600.05.5373626145
AGCGTCG268250.05.5129905145
TCGGAAG436500.05.231462145
TAGATCG166100.05.193667145
AGAGCGT367200.05.073729145
Produced by FastQC (version 0.11.5)