FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028490

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028490
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122631518
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA117350.05.75483255-59
CGTCGTG393750.05.4104004145
AGATCGG701950.05.316229145
GATCGGA656650.05.131232145
GCGTCGT393350.05.114373140-144
ATCGGAA697700.05.0682145
AGCGTCG426800.05.0084147145
Produced by FastQC (version 0.11.5)