Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005028537 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 53540584 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 7815 | 0.0 | 6.178373 | 45-49 |
AGATCGG | 32445 | 0.0 | 6.167825 | 145 |
TAGATCG | 12185 | 0.0 | 5.7123723 | 145 |
GATCGGA | 30900 | 0.0 | 5.660162 | 1 |
ATCGGAA | 32250 | 0.0 | 5.4855366 | 2 |
TCGGAAG | 33195 | 0.0 | 5.3948984 | 3 |
CTCGTAT | 9310 | 0.0 | 5.139222 | 40-44 |
CGGAAGA | 35390 | 0.0 | 5.101264 | 4 |
CGTATGC | 9310 | 0.0 | 5.0616546 | 45-49 |