FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53540584
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA57750.07.682423655-59
TCGCCGT70900.06.50293955-59
GAGCGTC276850.06.3106629
AGATCGG354200.05.6897526145
AGAGCGT310200.05.6787978
AGCGTCG221100.05.573876145
GCCGTAT84050.05.53727655-59
GCGTCGT204350.05.427676145
GATCGGA331250.05.29636051
GTCGCCG87150.05.22385555-59
ATCGGAA345300.05.165352
TCGGAAG355200.05.0613143
Produced by FastQC (version 0.11.5)