FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028541

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028541
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38410313
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG60400.07.24933145-49
GATCGGA236500.07.01066881
TCGGAAG252750.06.7689883
ATCGGAA247800.06.7583942
CGGAAGA269150.06.3565364
CTCGTAT70100.06.20509940-44
CGTATGC71250.05.982605545-49
TCTCGTA73100.05.890938840-44
AGATCGG244800.05.538352145
ATGCCGT83400.05.49349845-49
TATCTCG80300.05.290509740-44
TAGATCG92400.05.021788145
Produced by FastQC (version 0.11.5)