FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028578

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028578
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73560241
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC351250.06.56315379
CGCCGTA87500.06.19736355-59
AGAGCGT403750.05.8353758
GATCGGA428550.05.61265471
TCGCCGT100100.05.533152655-59
ATCGGAA447850.05.35849332
CGTCGTG266000.05.0964766145
TCGGAAG463350.05.0850983
AGCGTCG282300.05.007648145
Produced by FastQC (version 0.11.5)