FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005028601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55677589
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA260300.013.7538871
ATCGGAA281750.012.8407482
TCGGAAG295350.012.0764513
CGGAAGA313500.011.4235174
TATGCCG88200.010.8337245-49
CGTATGC101850.09.1397645-49
CTCGTAT103950.08.74517240-44
TCTCGTA107750.08.36947840-44
ATGCCGT123500.07.63145245-49
CTTACGG127150.07.58301630-34
GCCGTCT130400.07.261605350-54
TTACGGT131450.07.081269330-34
ATCTCGT136900.06.7144640-44
CGGTGAT136500.06.64910135-39
TCGTATG118050.06.509845345-49
ACTTACG147450.06.50953430-34
AGAGCAC630250.06.2225548
TGCCGTC126450.06.112311450-54
CGTCTTC163400.06.052424450-54
GAGCACA682050.05.98379239
Produced by FastQC (version 0.11.5)