FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52298809
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA61050.06.789277655-59
TCGCCGT75000.05.81632255-59
AGCGTCG226400.05.6326313145
CGTCGTG206500.05.543858145
AGATCGG353800.05.1403294145
TAGATCG135350.05.1391115145
GCCGTAT84700.05.133115355-59
Produced by FastQC (version 0.11.5)