FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74546941
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA409000.05.5841007145
AGCGTCG261950.05.4250493145
AGATCGG444950.05.2144055145
CGTCGTG236500.05.0891232145
GCGTCGT236600.05.086972145
ATCGGAA427250.05.0740547145
Produced by FastQC (version 0.11.5)