FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028665

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028665
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78687030
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG206250.014.14411545-49
CTCGTAT231550.012.56739440-44
GATCGGA679000.012.2402691
CGTATGC237100.011.74117145-49
ATGCCGT251000.011.66284145-49
TCTCGTA230250.011.59932240-44
TCGGAAG726850.011.5920223
ATCGGAA728200.011.5408072
CGGAAGA755600.011.18880754
GCCGTCT259000.010.60291850-54
TCCGATC57300.09.9970153
CGTCTTC307300.09.48843850-54
ATCTCGT280300.09.37298140-44
CCGTCTT310700.09.09527350-54
AGAGCAC1130800.07.8341618
GAGCACA1205750.07.40129769
GTATGCC421250.07.09381545-49
GAAGAGC1260750.07.07841736
CCGATCT84600.06.9421164
AATCTCG404100.06.939213840-44
Produced by FastQC (version 0.11.5)