Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005028696 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 56787739 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCCGTA | 5520 | 0.0 | 6.672343 | 55-59 |
ATCGGAA | 36330 | 0.0 | 5.766905 | 145 |
CGTCGTG | 20560 | 0.0 | 5.5006227 | 145 |
GCGTCGT | 20635 | 0.0 | 5.48063 | 145 |
GATCGGA | 35170 | 0.0 | 5.4624047 | 145 |
GAGCGTC | 28325 | 0.0 | 5.4513583 | 9 |
AGCGTCG | 22910 | 0.0 | 5.284474 | 145 |
TCGCCGT | 7025 | 0.0 | 5.119046 | 55-59 |
AGATCGG | 36775 | 0.0 | 5.1057253 | 145 |
AGAGCGT | 32185 | 0.0 | 5.0002117 | 8 |