FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75718197
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC337850.014.0758639
CGCCGTA94350.013.492022555-59
GATCGGA365600.012.9545111
AGAGCGT378950.012.7978598
ATCGGAA401000.012.0412072
TCGGAAG424000.011.4895083
TCGCCGT112750.011.44452955-59
CGGAAGA455900.010.5424324
AAGAGCG463800.010.5034427
GTCGCCG128850.010.03702355-59
GCCGTAT134400.09.66569755-59
TGGTCGC154450.08.53301250-54
CGTATCA168400.07.88646660-64
GTGGTCG170550.07.83800650-54
CCGTATC156900.06.41306460-64
GGTCGCC161150.06.288851355-59
TCTCGGT230100.06.194064645-49
AGCGTCG262050.05.8923789
GAAGAGC979000.05.5609646
CGGTGGT258550.05.36653350-54
Produced by FastQC (version 0.11.5)