FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70682327
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA303050.018.7521741
ATCGGAA332700.017.3043352
TCGGAAG345450.016.872383
CGGAAGA374000.015.4293264
TATGCCG119900.011.47583645-49
CTCGTAT137050.09.98754140-44
CGTATGC138850.09.60681245-49
TCTCGTA138800.09.34973140-44
ATGCCGT160800.08.57495445-49
AGAGCAC766400.08.087628
GCCGTCT170150.08.06123250-54
TCGTATG161450.07.39991145-49
GAGCACA838200.07.33436169
GAAGAGC869400.07.2712146
TGCCGTC162850.07.25624850-54
ATCTCGT179650.07.11073140-44
CGTCTTC217950.06.65250750-54
CCGTCTT221550.06.348077350-54
AAGAGCA1235100.05.3530697
ACACGTC273550.05.17313110-14
Produced by FastQC (version 0.11.5)