Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005028767 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17325971 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TATGCCG | 2600 | 0.0 | 8.141934 | 45-49 |
GATCGGA | 8895 | 0.0 | 7.67597 | 1 |
TCGGAAG | 9690 | 0.0 | 7.33216 | 3 |
ATCGGAA | 9450 | 0.0 | 7.288261 | 2 |
CTCGTAT | 3290 | 0.0 | 6.7428484 | 40-44 |
CGGAAGA | 10445 | 0.0 | 6.5938797 | 4 |
CGTATGC | 3200 | 0.0 | 6.5700116 | 45-49 |
AGATCGG | 9415 | 0.0 | 6.548115 | 145 |
TCTCGTA | 3355 | 0.0 | 6.0936074 | 40-44 |
ATGCCGT | 3600 | 0.0 | 6.081666 | 45-49 |
TATCTCG | 3480 | 0.0 | 5.666404 | 40-44 |
GCCGTCT | 3910 | 0.0 | 5.5624757 | 50-54 |
TAGATCG | 3675 | 1.231947E-7 | 5.1313744 | 145 |
ACGTCTG | 7940 | 0.0 | 5.115466 | 145 |