FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005028779

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005028779
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73476899
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG105850.06.586292745-49
GATCGGA391000.05.72539231
ATCGGAA418050.05.4776022
CGTATGC127850.05.430271645-49
TCGGAAG431350.05.30870153
AGATCGG411200.05.1985707145
CTCGTAT131250.05.1017240-44
CGGAAGA451050.05.0607844
Produced by FastQC (version 0.11.5)